Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colicin v production protein | PH7735_02339 | Not Available | Negative | 2502656 - 2503210 | 19672.2 |
| dna repair protein rada | PH7735_02340 | Q2YMH5 | Negative | 2503246 - 2504631 | 48327.1 |
| inner membrane protein yebs | PH7735_02341 | Not Available | Negative | 2504631 - 2505059 | 15478.8 |
| glutamine transport atp-binding protein glnq | PH7735_02342 | P30769 | Negative | 2505183 - 2505929 | 26654.3 |
| putative phospholipid abc transporter permease protein mlae | PH7735_02343 | Q4UNC7 | Negative | 2505926 - 2506711 | 27171.9 |
| alanine racemase, biosynthetic | PH7735_02344 | Q163V1 | Negative | 2506708 - 2507739 | 36558.8 |
| replicative dna helicase | PH7735_02345 | Q68WJ2 | Negative | 2507900 - 2509387 | 54402.6 |
| orotate phosphoribosyltransferase | PH7735_02346 | Q1GFQ6 | Negative | 2509687 - 2510367 | 25023.9 |
| dihydroorotase | PH7735_02347 | Q5LQ43 | Negative | 2510405 - 2511448 | 37748.2 |
| hypothetical protein | PH7735_02348 | Not Available | Negative | 2511507 - 2512454 | 35195.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
