Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate o-methyltransferase | PH7735_02329 | Q5LQ09 | Negative | 2492518 - 2493168 | 23790.8 |
| 5'-nucleotidase sure | PH7735_02330 | Q5LQ08 | Negative | 2493165 - 2493947 | 27477.4 |
| fatty acyl-coa reductase | PH7735_02331 | A0A1U8QWA2 | Negative | 2494067 - 2494714 | 22962.2 |
| hypothetical protein | PH7735_02332 | Not Available | Negative | 2494807 - 2495061 | 8554.54 |
| hypothetical protein | PH7735_02333 | Not Available | Negative | 2495213 - 2495782 | 20797.1 |
| amidophosphoribosyltransferase | PH7735_02334 | P0AG16 | Negative | 2495817 - 2497325 | 55355.3 |
| trap transporter solute receptor, taxi family | PH7735_02335 | Not Available | Negative | 2497663 - 2498958 | 47614.7 |
| glycerophosphoryl diester phosphodiesterase precursor | PH7735_02336 | D4AIS9 | Negative | 2499162 - 2500376 | 44303.4 |
| putative integral membrane protein | PH7735_02337 | Not Available | Negative | 2500621 - 2501088 | 17183.6 |
| putative nadh-flavin reductase | PH7735_02338 | Not Available | Negative | 2501085 - 2502380 | 45655.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
