Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_02209 | Not Available | Negative | 2371148 - 2371267 | 4367.12 |
| hypothetical protein | PH7735_02210 | Not Available | Negative | 2371293 - 2371568 | 10304.3 |
| hypothetical protein | PH7735_02211 | Not Available | Negative | 2371593 - 2372336 | 27116.8 |
| alkaline phosphatase precursor | PH7735_02212 | Q47910 | Negative | 2372374 - 2374092 | 62304.9 |
| acid-resistance membrane protein | PH7735_02213 | Not Available | Negative | 2374147 - 2374875 | 25954.4 |
| putative membrane protein | PH7735_02214 | Not Available | Negative | 2374838 - 2375347 | 17385.8 |
| hypothetical protein | PH7735_02215 | Not Available | Negative | 2375495 - 2375959 | 17928.4 |
| arylsulfatase precursor | PH7735_02216 | Q32KH5 | Negative | 2375956 - 2377038 | 39735.4 |
| transcriptional regulator hild | PH7735_02217 | Not Available | Positive | 2377335 - 2378345 | 37362.3 |
| Trna-arg | Not Available | Not Available | Positive | 2378379 - 2378456 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
