Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_02199 | Not Available | Negative | 2364152 - 2364475 | 11943.3 |
| hypothetical protein | PH7735_02200 | Not Available | Negative | 2364594 - 2365247 | 23578.2 |
| antibiotic biosynthesis monooxygenase | PH7735_02201 | Not Available | Positive | 2365389 - 2365709 | 12345.6 |
| universal stress protein f | PH7735_02202 | Not Available | Positive | 2365787 - 2366194 | 14711.6 |
| universal stress protein f | PH7735_02203 | P67092 | Positive | 2366222 - 2366629 | 14559.5 |
| hypothetical protein | PH7735_02204 | Not Available | Positive | 2366639 - 2367148 | 18023.6 |
| rhodanese-like domain protein | PH7735_02205 | Not Available | Positive | 2367195 - 2367782 | 21324.4 |
| heme utilization protein hutz | PH7735_02206 | Not Available | Negative | 2367801 - 2368304 | 17723.1 |
| hypothetical protein | PH7735_02207 | Not Available | Positive | 2368404 - 2368895 | 18447.5 |
| excinuclease abc subunit b | PH7735_02208 | Q98I01 | Negative | 2368905 - 2371088 | 81342.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
