Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_00179 | Not Available | Negative | 198315 - 199529 | 43591.7 |
| hypothetical protein | PH7735_00180 | Not Available | Positive | 199663 - 199992 | 12196.0 |
| putative n-acetyltransferase ysne | PH7735_00181 | Not Available | Negative | 200049 - 200507 | 16706.8 |
| cobalt transporter subunit cbta (proposed) | PH7735_00182 | Not Available | Negative | 200628 - 201317 | 24319.3 |
| cobalt transporter subunit cbtb (proposed) | PH7735_00183 | Not Available | Negative | 201336 - 201506 | 5772.09 |
| chromosome partition protein smc | PH7735_00184 | A3PMS2 | Positive | 202104 - 205559 | 127344.0 |
| hypothetical protein | PH7735_00185 | Not Available | Positive | 205686 - 206042 | 13222.5 |
| hemolysin, plasmid | PH7735_00186 | Not Available | Negative | 206047 - 207564 | 53667.8 |
| membrane-bound lytic murein transglycosylase b precursor | PH7735_00187 | Not Available | Negative | 207596 - 208765 | 42792.1 |
| cobalamin biosynthesis protein | PH7735_00188 | Q1GDE9 | Negative | 208824 - 209732 | 32679.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
