Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sporulation related domain protein | PH7735_02149 | Not Available | Positive | 2316448 - 2317446 | 34563.2 |
| beta-hexosaminidase | PH7735_02150 | Q0A911 | Positive | 2317422 - 2318435 | 36611.6 |
| segregation and condensation protein a | PH7735_02151 | Q83CP8 | Positive | 2318440 - 2319237 | 30063.2 |
| hypothetical protein | PH7735_02152 | A4J3L6 | Positive | 2319230 - 2319892 | 24849.8 |
| hypothetical protein | PH7735_02153 | Not Available | Positive | 2320009 - 2320236 | 8319.15 |
| purine efflux pump pbue | PH7735_02154 | Not Available | Negative | 2320233 - 2321378 | 39839.5 |
| leucine-responsive regulatory protein | PH7735_02155 | O59188 | Positive | 2321453 - 2321989 | 19661.6 |
| deoxycytidine triphosphate deaminase | PH7735_02156 | Not Available | Negative | 2321994 - 2323070 | 38901.5 |
| Trna-pro | Not Available | Not Available | Positive | 2323141 - 2323217 | Not Available |
| hypothetical protein | PH7735_02158 | P30791 | Negative | 2323278 - 2324225 | 34599.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
