Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_02129 | Not Available | Positive | 2298883 - 2299152 | 10154.0 |
| hypothetical protein | PH7735_02130 | Not Available | Positive | 2299291 - 2299950 | 23573.5 |
| ribosomal rna large subunit methyltransferase i | PH7735_02131 | B5FEQ2 | Positive | 2299993 - 2301189 | 42633.2 |
| hypothetical protein | PH7735_02132 | Not Available | Positive | 2301186 - 2301734 | 20310.7 |
| metalloprotease loip precursor | PH7735_02133 | Not Available | Negative | 2301738 - 2302430 | 25525.1 |
| hypothetical protein | PH7735_02134 | Not Available | Positive | 2302560 - 2302925 | 13000.4 |
| vwa domain containing coxe-like protein | PH7735_02135 | Not Available | Negative | 2302922 - 2304106 | 45692.2 |
| hypothetical protein | PH7735_02136 | Not Available | Negative | 2304111 - 2304278 | 6070.86 |
| hypothetical protein | PH7735_02137 | Not Available | Negative | 2304284 - 2305648 | 50787.9 |
| ribosomal-protein-alanine acetyltransferase | PH7735_02138 | Not Available | Negative | 2305648 - 2306115 | 17934.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
