Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| queuine trna-ribosyltransferase | PH7735_02089 | Q1GIL3 | Positive | 2256097 - 2257227 | 41772.3 |
| hypothetical protein | PH7735_02090 | Not Available | Positive | 2257303 - 2257899 | 21274.7 |
| hypothetical protein | PH7735_02091 | Not Available | Positive | 2257937 - 2258038 | 3447.06 |
| lon protease | PH7735_02092 | O69177 | Positive | 2258144 - 2260540 | 87827.1 |
| transcriptional regulator hu subunit alpha | PH7735_02093 | Not Available | Positive | 2260733 - 2261128 | 13694.7 |
| Trna-val | Not Available | Not Available | Positive | 2261393 - 2261468 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 2261797 - 2261873 | Not Available |
| hemolysin, chromosomal | PH7735_02096 | Not Available | Positive | 2262053 - 2263723 | 59452.2 |
| Trna-asp | Not Available | Not Available | Positive | 2263805 - 2263881 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 2263967 - 2264043 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
