Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate-semialdehyde dehydrogenase | PH7735_00169 | Not Available | Negative | 188036 - 189511 | 52539.8 |
| putative esterase of the alpha/beta hydrolase fold protein | PH7735_00170 | Not Available | Positive | 189606 - 190415 | 29621.2 |
| alcohol dehydrogenase | PH7735_00171 | Q9WWW2 | Positive | 190412 - 191995 | 57021.1 |
| disulfide-bond oxidoreductase yghu | PH7735_00172 | Q46845 | Negative | 191992 - 192873 | 32874.5 |
| ferritin bfrb | PH7735_00173 | Q2FFK2 | Negative | 193066 - 193581 | 19164.4 |
| hypothetical protein | PH7735_00174 | Q1GDL5 | Negative | 193855 - 194061 | 8071.0 |
| rpsu-divergently transcribed protein | PH7735_00175 | Not Available | Positive | 194171 - 194845 | 24830.3 |
| beta-ketoacyl-acyl-carrier-protein synthase i | PH7735_00176 | Q53FA7 | Positive | 195039 - 196022 | 34663.7 |
| pyruvate dehydrogenase complex repressor | PH7735_00177 | P0A2S3 | Negative | 196076 - 196843 | 29130.9 |
| 2-aminoadipate transaminase | PH7735_00178 | Q72LL6 | Positive | 197008 - 198225 | 43960.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
