Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cob(i)yrinic acid a,c-diamide adenosyltransferase | PH7735_02069 | P29930 | Positive | 2239547 - 2240167 | 23351.1 |
| hypothetical protein | PH7735_02070 | Not Available | Positive | 2240169 - 2240435 | 10142.4 |
| hypothetical protein | PH7735_02071 | Not Available | Positive | 2240445 - 2240795 | 12397.8 |
| hypothetical protein | PH7735_02072 | Not Available | Positive | 2240792 - 2241136 | 12280.6 |
| cobyric acid synthase | PH7735_02073 | D5AV13 | Positive | 2241221 - 2242669 | 50718.6 |
| hypothetical protein | PH7735_02074 | Not Available | Negative | 2242900 - 2243919 | 36846.1 |
| hypothetical protein | PH7735_02075 | Not Available | Negative | 2243937 - 2244995 | 38195.1 |
| bacillibactin transport regulator | PH7735_02076 | Not Available | Positive | 2245236 - 2246279 | 37593.2 |
| putative hth-type transcriptional regulator ydfh | PH7735_02077 | Not Available | Negative | 2246374 - 2247090 | 26188.6 |
| spermidine/putrescine import atp-binding protein pota | PH7735_02078 | A0LUE6 | Positive | 2247327 - 2248310 | 35430.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
