Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-lactate utilization operon repressor | PH7735_02049 | Not Available | Positive | 2219315 - 2220016 | 26062.3 |
| lamb/ycsf family protein | PH7735_02050 | A8HRP6 | Positive | 2220208 - 2220969 | 26259.7 |
| sporulation inhibitor kipi | PH7735_02051 | Not Available | Positive | 2220966 - 2221661 | 24739.5 |
| kipi antagonist | PH7735_02052 | Q7WY77 | Positive | 2221658 - 2222677 | 35605.1 |
| hypothetical protein | PH7735_02053 | Not Available | Positive | 2222956 - 2223813 | 32547.7 |
| uroporphyrinogen-iii c-methyltransferase | PH7735_02054 | P21636 | Negative | 2223839 - 2224591 | 27470.3 |
| hypothetical protein | PH7735_02055 | Not Available | Negative | 2224664 - 2225344 | 23675.5 |
| uroporphyrinogen-iii c-methyltransferase | PH7735_02056 | Q42606 | Negative | 2225716 - 2226438 | 25595.8 |
| cobyrinic acid a,c-diamide synthase | PH7735_02057 | O68108 | Negative | 2226435 - 2227745 | 45704.5 |
| precorrin-4 c(11)-methyltransferase | PH7735_02058 | O68100 | Negative | 2227831 - 2228625 | 27934.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
