Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase (gnat) family protein | PH7735_02039 | Not Available | Positive | 2209878 - 2210357 | 17405.5 |
| streptogramin a acetyltransferase | PH7735_02040 | Not Available | Negative | 2210402 - 2211064 | 23977.8 |
| putative pep-cterm system tpr-repeat lipoprotein | PH7735_02041 | Not Available | Negative | 2211229 - 2212509 | 46213.6 |
| capsular polysaccharide phosphotransferase sacb | PH7735_02042 | Q7X4S1 | Negative | 2212640 - 2213638 | 37244.8 |
| leucine-responsive regulatory protein | PH7735_02043 | Q44333 | Negative | 2213733 - 2214179 | 16439.9 |
| universal stress protein family protein | PH7735_02044 | Not Available | Positive | 2214374 - 2214811 | 15659.7 |
| amino-acid carrier protein alst | PH7735_02045 | Q6LX42 | Positive | 2214821 - 2216374 | 54380.0 |
| putative membrane protein | PH7735_02046 | O86576 | Positive | 2216556 - 2217173 | 21144.4 |
| (r)-stereoselective amidase | PH7735_02047 | Not Available | Negative | 2217170 - 2217967 | 28256.7 |
| xaa-pro dipeptidase | PH7735_02048 | P76524 | Negative | 2217971 - 2219128 | 42142.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
