Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylserine decarboxylase | PH7735_01850 | Q5LKT7 | Negative | 2016470 - 2017162 | 25165.7 |
| putative peroxidase-related enzyme | PH7735_01851 | Not Available | Positive | 2017596 - 2018168 | 21264.3 |
| hypothetical protein | PH7735_01852 | Not Available | Positive | 2018222 - 2018632 | 14488.9 |
| copper outer membrane regulator | PH7735_01853 | Not Available | Positive | 2018747 - 2019385 | 23691.1 |
| nucleoside diphosphate kinase | PH7735_01854 | A8LIX8 | Negative | 2019929 - 2020351 | 15057.8 |
| putative abc transporter atp-binding protein yhes | PH7735_01855 | P63390 | Positive | 2020443 - 2022329 | 69530.7 |
| inner membrane protein | PH7735_01856 | Q59071 | Positive | 2022346 - 2022963 | 21746.4 |
| clan aa aspartic protease | PH7735_01857 | Not Available | Positive | 2023022 - 2023603 | 20985.4 |
| dna polymerase iii subunit chi | PH7735_01858 | Not Available | Negative | 2023635 - 2024105 | 17197.2 |
| cytosol aminopeptidase | PH7735_01859 | A8LI79 | Negative | 2024107 - 2025591 | 52352.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
