Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional activator protein luxr | PH7735_01810 | Not Available | Negative | 1971293 - 1972039 | 28230.6 |
| 3-dehydroquinate dehydratase | PH7735_01811 | Q5LRZ7 | Negative | 1972036 - 1972479 | 15515.8 |
| cyclolysin | PH7735_01812 | Not Available | Negative | 1973057 - 1976599 | 122887.0 |
| phosphate regulon transcriptional regulatory protein phob | PH7735_01813 | Q52990 | Negative | 1976901 - 1977590 | 25803.1 |
| phou-like phosphate uptake regulator | PH7735_01814 | Q52989 | Negative | 1977611 - 1978324 | 27138.7 |
| phosphate import atp-binding protein pstb | PH7735_01815 | Q1GH74 | Negative | 1978337 - 1979134 | 29485.2 |
| phosphate transport system permease protein psta | PH7735_01816 | P0A627 | Negative | 1979155 - 1980507 | 48145.5 |
| phosphate transport system permease protein pstc | PH7735_01817 | P46339 | Negative | 1980504 - 1981964 | 51134.4 |
| phosphate-binding protein psts precursor | PH7735_01818 | Not Available | Negative | 1982042 - 1983076 | 36288.8 |
| alkaline phosphatase synthesis sensor protein phor | PH7735_01819 | P23545 | Negative | 1983208 - 1984248 | 38055.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
