Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein obg | PH7735_01800 | Q5LRY4 | Positive | 1961737 - 1962774 | 37284.4 |
| glutamate 5-kinase | PH7735_01801 | Q5LRY5 | Positive | 1962762 - 1963868 | 38594.1 |
| gamma-glutamyl phosphate reductase | PH7735_01802 | Q5LRY6 | Positive | 1963935 - 1965203 | 44351.4 |
| hypothetical protein | PH7735_01803 | Q2YQA5 | Negative | 1965209 - 1965808 | 21345.5 |
| hypothetical protein | PH7735_01804 | Not Available | Positive | 1965838 - 1966029 | 6942.31 |
| hypothetical protein | PH7735_01805 | D5AQD6 | Positive | 1966141 - 1966914 | 29090.8 |
| 2-acyl-glycerophospho-ethanolamine acyltransferase | PH7735_01806 | D5AQD5 | Positive | 1966911 - 1967747 | 31285.1 |
| outer membrane protein (porin) | PH7735_01807 | Not Available | Negative | 1967744 - 1968877 | 40823.1 |
| 30s ribosomal protein s2 | PH7735_01808 | Q1GHC3 | Positive | 1969146 - 1969919 | 27582.2 |
| elongation factor ts | PH7735_01809 | Q165Z4 | Positive | 1969992 - 1970867 | 30454.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
