Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_01790 | Not Available | Negative | 1955612 - 1955818 | 7281.87 |
| hypothetical protein | PH7735_01791 | Not Available | Positive | 1955955 - 1956371 | 15819.6 |
| integrase | PH7735_01792 | Not Available | Positive | 1956373 - 1957509 | 42144.0 |
| hypothetical protein | PH7735_01793 | Not Available | Positive | 1957506 - 1958174 | 26259.2 |
| Trna-ser | Not Available | Not Available | Positive | 1958257 - 1958346 | Not Available |
| hypothetical protein | PH7735_01795 | Not Available | Positive | 1958476 - 1959315 | 30549.2 |
| 50s ribosomal protein l21 | PH7735_01796 | Q165Y2 | Positive | 1959513 - 1960145 | 22024.6 |
| hypothetical protein | PH7735_01797 | A8LK04 | Positive | 1960169 - 1960438 | 9522.59 |
| cysteine/o-acetylserine efflux protein | PH7735_01798 | Q57L56 | Positive | 1960521 - 1961114 | 20850.9 |
| hypothetical protein | PH7735_01799 | Not Available | Positive | 1961128 - 1961667 | 19416.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
