Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| retron-type reverse transcriptase | PH7735_01780 | Not Available | Negative | 1947257 - 1948924 | 63607.7 |
| hypothetical protein | PH7735_01781 | Not Available | Negative | 1949169 - 1949321 | 5449.62 |
| hypothetical protein | PH7735_01782 | Not Available | Negative | 1949318 - 1949485 | 6430.75 |
| phage major capsid protein, hk97 family | PH7735_01783 | Not Available | Negative | 1949691 - 1950371 | 23953.9 |
| hypothetical protein | PH7735_01784 | Not Available | Negative | 1950412 - 1950810 | 14346.9 |
| hypothetical protein | PH7735_01785 | Not Available | Negative | 1951200 - 1951406 | 7432.16 |
| hypothetical protein | PH7735_01786 | Not Available | Negative | 1951418 - 1951612 | 6872.36 |
| hypothetical protein | PH7735_01787 | Not Available | Negative | 1951678 - 1952073 | 14598.0 |
| hypothetical protein | PH7735_01788 | Not Available | Negative | 1952374 - 1952616 | 8846.5 |
| putative p-loop atpase | PH7735_01789 | Not Available | Negative | 1953175 - 1955469 | 85629.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
