Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative kinase | PH7735_01720 | Not Available | Negative | 1852915 - 1853409 | 18387.0 |
| pyruvate dehydrogenase complex repressor | PH7735_01721 | Not Available | Negative | 1853406 - 1854158 | 27254.2 |
| putative metal-binding integral membrane protein | PH7735_01722 | Not Available | Positive | 1854239 - 1855009 | 27625.9 |
| hypothetical protein | PH7735_01723 | Not Available | Positive | 1855025 - 1855654 | 22643.0 |
| dinb family protein | PH7735_01724 | Not Available | Positive | 1855666 - 1856181 | 19053.8 |
| dimethylsulfonioproprionate demethylase dmda | PH7735_01725 | Q5LS57 | Positive | 1856172 - 1857275 | 41032.2 |
| acrylyl-coa reductase acui | PH7735_01726 | Q5LS56 | Positive | 1857337 - 1858329 | 34613.7 |
| hit-like protein | PH7735_01727 | Q58276 | Positive | 1858398 - 1858814 | 15486.7 |
| putative peroxiredoxins | PH7735_01728 | Not Available | Positive | 1858984 - 1859418 | 14751.5 |
| cysteine desulfurase | PH7735_01729 | Q9HMM6 | Positive | 1859551 - 1860771 | 44273.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
