Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_00129 | Not Available | Negative | 144462 - 144791 | 12233.8 |
| utp--glucose-1-phosphate uridylyltransferase | PH7735_00130 | Q4A122 | Negative | 144979 - 145860 | 32048.2 |
| putative sugar transferase epsl | PH7735_00131 | Q04664 | Negative | 145898 - 146560 | 24725.5 |
| response regulator protein vrar | PH7735_00132 | O07528 | Positive | 147226 - 147840 | 22024.8 |
| chain length determinant protein epsf | PH7735_00133 | Not Available | Negative | 147855 - 149921 | 75296.1 |
| n-glycosyltransferase | PH7735_00134 | Not Available | Negative | 149923 - 150810 | 32100.5 |
| hypothetical protein | PH7735_00135 | Not Available | Negative | 150810 - 151346 | 19673.4 |
| oligosaccharide biosynthesis protein alg14 like protein | PH7735_00136 | Not Available | Negative | 151359 - 151829 | 16719.3 |
| d-inositol 3-phosphate glycosyltransferase | PH7735_00137 | Not Available | Negative | 151995 - 153200 | 44262.4 |
| n-acetylglucosaminyl-diphospho-decaprenol l-rhamnosyltransferase | PH7735_00138 | Not Available | Negative | 153197 - 154129 | 34495.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
