Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_01649 | Not Available | Negative | 1795118 - 1795219 | 3552.19 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | PH7735_01650 | Not Available | Negative | 1795176 - 1795736 | 20714.5 |
| maleylacetoacetate isomerase | PH7735_01651 | Q9P6M1 | Negative | 1796036 - 1796656 | 22839.6 |
| nadh oxidase | PH7735_01652 | Not Available | Positive | 1796885 - 1798168 | 47958.5 |
| major facilitator superfamily protein | PH7735_01653 | Not Available | Negative | 1798116 - 1799372 | 44841.8 |
| hypothetical protein | PH7735_01654 | Not Available | Positive | 1799626 - 1799991 | 12529.4 |
| putative iron-regulated membrane protein | PH7735_01655 | Not Available | Positive | 1800055 - 1800744 | 25166.7 |
| putative iron-regulated membrane protein | PH7735_01656 | Not Available | Positive | 1800781 - 1801443 | 23641.9 |
| hypothetical protein | PH7735_01657 | Not Available | Positive | 1801591 - 1801899 | 11670.9 |
| hypothetical protein | PH7735_01658 | Not Available | Positive | 1802064 - 1803245 | 42818.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
