Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_01619 | Not Available | Negative | 1768594 - 1769190 | 23049.5 |
| recombinase a | PH7735_01620 | Q5LRU0 | Positive | 1769387 - 1770469 | 38747.4 |
| hypothetical protein | PH7735_01621 | Not Available | Positive | 1770466 - 1771035 | 21290.5 |
| alanine--trna ligase | PH7735_01622 | Q5LRU1 | Positive | 1771124 - 1773796 | 96436.6 |
| hypothetical protein | PH7735_01623 | Not Available | Positive | 1773800 - 1774087 | 10261.1 |
| amidohydrolase egtc | PH7735_01624 | P54004 | Positive | 1774107 - 1774889 | 29060.2 |
| ligand-gated ion channel | PH7735_01625 | Not Available | Negative | 1774886 - 1775965 | 40968.1 |
| hypothetical protein | PH7735_01626 | O25225 | Negative | 1776074 - 1777894 | 66625.7 |
| methyl viologen resistance protein c | PH7735_01627 | P23895 | Negative | 1777958 - 1778293 | 12066.4 |
| hypothetical protein | PH7735_01628 | Not Available | Negative | 1778400 - 1779104 | 27789.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
