Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit a | PH7735_01609 | Q0BST5 | Negative | 1752266 - 1755004 | 101101.0 |
| hypothetical protein | PH7735_01610 | Not Available | Positive | 1755254 - 1756318 | 39119.5 |
| antilisterial bacteriocin subtilosin biosynthesis protein alba | PH7735_01611 | Not Available | Negative | 1756315 - 1757268 | 35309.7 |
| glucose-6-phosphate 1-dehydrogenase | PH7735_01612 | Q9Z3S2 | Positive | 1757440 - 1758888 | 54537.6 |
| 6-phosphogluconolactonase | PH7735_01613 | Q9PEG5 | Positive | 1758867 - 1759556 | 24826.0 |
| glucose-6-phosphate isomerase | PH7735_01614 | Q28QX4 | Positive | 1759559 - 1761172 | 58875.2 |
| na(+)-translocating nadh-quinone reductase subunit f | PH7735_01615 | P0DX10 | Negative | 1761250 - 1763298 | 72879.0 |
| inosine-5'-monophosphate dehydrogenase | PH7735_01616 | P44334 | Positive | 1763622 - 1765070 | 50689.8 |
| ribosomal rna small subunit methyltransferase b | PH7735_01617 | A6TEU2 | Positive | 1765071 - 1766237 | 42430.6 |
| blue-light-activated protein | PH7735_01618 | P0DOA0 | Positive | 1766345 - 1768597 | 82332.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
