Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinamide-nucleotide amidohydrolase pncc | PH7735_01549 | P51967 | Negative | 1687149 - 1687625 | 16115.3 |
| phosphatidylglycerophosphatase a | PH7735_01550 | Q8A7J9 | Negative | 1687622 - 1688104 | 17661.0 |
| bifunctional enzyme ispd/ispf | PH7735_01551 | Q5LRN5 | Negative | 1688101 - 1689243 | 39947.4 |
| putative trna-dihydrouridine synthase | PH7735_01552 | Q08111 | Positive | 1689515 - 1690516 | 35035.0 |
| nitrogen regulation protein nr(ii) | PH7735_01553 | P09431 | Positive | 1690513 - 1691598 | 39118.9 |
| nitrogen assimilation regulatory protein | PH7735_01554 | P09432 | Positive | 1691601 - 1692965 | 50086.4 |
| sensor protein kinase walk | PH7735_01555 | Q04850 | Positive | 1693069 - 1695306 | 83521.6 |
| nitrogen regulation protein nr(i) | PH7735_01556 | Q04849 | Positive | 1695331 - 1696743 | 52157.4 |
| hypothetical protein | PH7735_01557 | Not Available | Negative | 1696762 - 1697196 | 15707.9 |
| hypothetical protein | PH7735_01558 | Not Available | Negative | 1697220 - 1697696 | 16515.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
