Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potential acrab operon repressor | PH7735_01529 | Not Available | Negative | 1668301 - 1668918 | 22286.5 |
| polyphosphate kinase 2 | PH7735_01530 | Q5LSN8 | Negative | 1668911 - 1669780 | 33560.7 |
| homoserine o-succinyltransferase | PH7735_01531 | Q165M8 | Negative | 1669868 - 1670791 | 35318.8 |
| hypothetical protein | PH7735_01532 | Not Available | Negative | 1670837 - 1671694 | 32196.0 |
| putative dmt superfamily transporter inner membrane protein | PH7735_01533 | Not Available | Negative | 1671884 - 1672807 | 33111.6 |
| carboxylate/amino acid/amine transporter | PH7735_01534 | Not Available | Negative | 1672904 - 1673800 | 32327.5 |
| hypothetical protein | PH7735_01535 | Not Available | Negative | 1673797 - 1674153 | 12758.2 |
| gmp synthase | PH7735_01536 | Q5LRL6 | Negative | 1674264 - 1675823 | 57542.7 |
| helix-turn-helix domain protein | PH7735_01537 | C0H3S9 | Positive | 1675988 - 1676296 | 11717.0 |
| nadh oxidase | PH7735_01538 | A0A482NAR8 | Positive | 1676369 - 1677580 | 42756.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
