Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallo-beta-lactamase superfamily protein | PH7735_01509 | Not Available | Positive | 1649405 - 1650328 | 33376.3 |
| phosphoglycolate phosphatase, chromosomal | PH7735_01510 | A3PNX3 | Positive | 1650403 - 1651065 | 24176.0 |
| pa14 domain protein | PH7735_01511 | Not Available | Positive | 1651178 - 1651753 | 20370.6 |
| hypothetical protein | PH7735_01512 | Not Available | Negative | 1651833 - 1652507 | 25660.5 |
| hypothetical protein | PH7735_01513 | Not Available | Negative | 1652597 - 1652920 | 11140.2 |
| putative restriction endonuclease | PH7735_01514 | Not Available | Negative | 1653208 - 1654176 | 36981.0 |
| dna topoisomerase 4 subunit b | PH7735_01515 | P94281 | Negative | 1654188 - 1656146 | 71771.6 |
| hypothetical protein | PH7735_01516 | Not Available | Negative | 1656328 - 1656618 | 10695.5 |
| polyphosphate kinase 2 | PH7735_01517 | Q5LU04 | Positive | 1656898 - 1657887 | 37538.5 |
| hypothetical protein | PH7735_01518 | Not Available | Negative | 1657916 - 1658569 | 24106.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
