Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| camphor resistance protein crcb | PH7735_01499 | Not Available | Positive | 1636262 - 1637107 | 29927.1 |
| dihydrolipoyl dehydrogenase | PH7735_01500 | Q9KPF6 | Negative | 1637170 - 1638903 | 59861.7 |
| dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex | PH7735_01501 | Q59098 | Negative | 1638916 - 1640178 | 44175.2 |
| pyruvate dehydrogenase e1 component | PH7735_01502 | Q59097 | Negative | 1640202 - 1642856 | 99596.4 |
| xanthine permease xanp | PH7735_01503 | P50487 | Negative | 1643063 - 1644475 | 48220.3 |
| ureidoglycolate hydrolase | PH7735_01504 | O68109 | Negative | 1644564 - 1645076 | 18366.9 |
| uric acid degradation bifunctional protein | PH7735_01505 | O13842 | Negative | 1645046 - 1646461 | 53029.3 |
| 5-hydroxyisourate hydrolase | PH7735_01506 | Q92UG5 | Positive | 1646616 - 1646972 | 12879.2 |
| d-malate degradation protein r | PH7735_01507 | Not Available | Negative | 1646985 - 1647899 | 34008.0 |
| putative membrane protein | PH7735_01508 | Not Available | Positive | 1648031 - 1649260 | 45857.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
