Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hish 1 | PH7735_01489 | Q5LU93 | Negative | 1627200 - 1627838 | 23336.8 |
| imidazoleglycerol-phosphate dehydratase | PH7735_01490 | Q1GF01 | Negative | 1627844 - 1628431 | 21605.6 |
| asnc family protein | PH7735_01491 | Not Available | Positive | 1628563 - 1628802 | 9060.0 |
| guanine deaminase | PH7735_01492 | P76641 | Negative | 1628875 - 1630188 | 47830.8 |
| magnesium transporter mgte | PH7735_01493 | Q830V1 | Positive | 1630312 - 1631703 | 50452.3 |
| 5-formyltetrahydrofolate cyclo-ligase family protein | PH7735_01494 | A0R3H2 | Positive | 1631717 - 1632277 | 20110.0 |
| putative hemolysin | PH7735_01495 | Not Available | Negative | 1632274 - 1632510 | 8072.48 |
| metallophosphoesterase, mg_246/ family | PH7735_01496 | O31775 | Positive | 1632636 - 1633454 | 29478.5 |
| putative dmt superfamily transporter inner membrane protein | PH7735_01497 | Not Available | Positive | 1633451 - 1634350 | 32475.9 |
| transporter, divalent anion:na+ symporter (dass) family | PH7735_01498 | Not Available | Positive | 1634395 - 1636170 | 63851.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
