Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| k(+)/h(+) antiporter | PH7735_01459 | C4ZPX3 | Negative | 1599211 - 1601082 | 67254.2 |
| leucine-responsive regulatory protein | PH7735_01460 | P37424 | Negative | 1601107 - 1601562 | 16823.3 |
| 4-hydroxyphenylpyruvate dioxygenase | PH7735_01461 | O06695 | Positive | 1601715 - 1602812 | 41272.3 |
| hypothetical protein | PH7735_01462 | Not Available | Negative | 1602892 - 1603770 | 31665.1 |
| arylsulfatase | PH7735_01463 | P51691 | Positive | 1603914 - 1605521 | 60176.5 |
| hypothetical protein | PH7735_01464 | Not Available | Negative | 1605602 - 1607977 | 82658.3 |
| 26 kda periplasmic immunogenic protein precursor | PH7735_01465 | Not Available | Positive | 1608141 - 1608824 | 23948.8 |
| methionine gamma-lyase | PH7735_01466 | Q9WZY4 | Negative | 1608890 - 1610182 | 45578.7 |
| ribonuclease z | PH7735_01467 | Not Available | Negative | 1610389 - 1611441 | 36290.1 |
| hypothetical protein | PH7735_01468 | Not Available | Negative | 1611591 - 1612019 | 15439.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
