Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_01339 | Not Available | Positive | 1474737 - 1474991 | 9358.09 |
| diacylglycerol kinase | PH7735_01340 | Not Available | Positive | 1475053 - 1475409 | 12796.7 |
| hypothetical protein | PH7735_01341 | Not Available | Positive | 1475529 - 1476866 | 50957.1 |
| ribosomal protein s12 methylthiotransferase rimo | PH7735_01342 | Q1GIY4 | Negative | 1476987 - 1478393 | 51584.2 |
| putative assembly protein | PH7735_01343 | Not Available | Positive | 1478495 - 1480423 | 67156.8 |
| multidrug resistance protein d | PH7735_01344 | P32482 | Positive | 1480446 - 1481645 | 41496.6 |
| arogenate dehydrogenase | PH7735_01345 | Not Available | Positive | 1481837 - 1482586 | 26748.9 |
| gcra cell cycle regulator | PH7735_01346 | Not Available | Negative | 1482658 - 1483236 | 20840.1 |
| inner membrane transport permease yadh | PH7735_01347 | Not Available | Positive | 1483362 - 1484162 | 28333.9 |
| nudix domain protein | PH7735_01348 | Not Available | Negative | 1484230 - 1484934 | 26284.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
