Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysz-like protein | PH7735_01329 | Not Available | Negative | 1469559 - 1470275 | 26328.9 |
| putative nad(p)h nitroreductase ydja | PH7735_01330 | P0ACY2 | Negative | 1470260 - 1470838 | 20691.9 |
| histone deacetylase-like amidohydrolase | PH7735_01331 | Q9HXM1 | Negative | 1470892 - 1472013 | 40198.6 |
| hypothetical protein | PH7735_01332 | A1B422 | Positive | 1472139 - 1472393 | 9010.04 |
| hypothetical protein | PH7735_01333 | Not Available | Negative | 1472390 - 1472635 | 9069.71 |
| tpr repeat-containing protein yfgc precursor | PH7735_01334 | Not Available | Positive | 1472743 - 1473450 | 25052.7 |
| hypothetical protein | PH7735_01335 | Q9XWF4 | Positive | 1473454 - 1473819 | 13371.1 |
| hypothetical protein | PH7735_01336 | Not Available | Positive | 1473908 - 1474171 | 9384.95 |
| hypothetical protein | PH7735_01337 | Not Available | Positive | 1474168 - 1474446 | 10651.5 |
| hypothetical protein | PH7735_01338 | Not Available | Positive | 1474443 - 1474712 | 9539.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
