Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysin, chromosomal | PH7735_01309 | Not Available | Positive | 1443923 - 1445782 | 65078.4 |
| putative sulfate transporterc/mt1781 | PH7735_01310 | O04722 | Negative | 1445739 - 1447517 | 62430.7 |
| arylsulfatase | PH7735_01311 | Q1M964 | Negative | 1447522 - 1449165 | 61714.6 |
| trap transporter solute receptor, taxi family | PH7735_01312 | Not Available | Negative | 1449222 - 1450253 | 36542.3 |
| l-dehydroascorbate transporter large permease subunit | PH7735_01313 | Not Available | Negative | 1450276 - 1452288 | 70615.1 |
| dna-binding transcriptional activator mhpr | PH7735_01314 | Not Available | Positive | 1452302 - 1453048 | 26769.2 |
| hemolysin, chromosomal | PH7735_01315 | Not Available | Negative | 1453342 - 1453887 | 18681.0 |
| Trna-gln | Not Available | Not Available | Positive | 1454192 - 1454266 | Not Available |
| (r)-benzylsuccinyl-coa dehydrogenase | PH7735_01317 | Q5ZHT1 | Positive | 1454479 - 1455708 | 45645.9 |
| carbamoyl-phosphate synthase large chain | PH7735_01318 | O50236 | Negative | 1456074 - 1459406 | 120675.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
