Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_01299 | Not Available | Negative | 1404832 - 1405947 | 41025.4 |
| cyclolysin | PH7735_01300 | Not Available | Positive | 1406164 - 1416852 | 362708.0 |
| cyclolysin | PH7735_01301 | Not Available | Positive | 1417271 - 1422706 | 189666.0 |
| glutathione-dependent formaldehyde-activating enzyme | PH7735_01302 | Not Available | Positive | 1422924 - 1423331 | 14519.5 |
| yaeq protein | PH7735_01303 | P0A1S7 | Positive | 1423557 - 1424105 | 20721.7 |
| hypothetical protein | PH7735_01304 | Not Available | Negative | 1424044 - 1424403 | 13919.7 |
| cyclolysin | PH7735_01305 | Not Available | Positive | 1424712 - 1435475 | 359286.0 |
| cyclolysin | PH7735_01306 | Not Available | Positive | 1435742 - 1439722 | 133223.0 |
| transcriptional regulator hild | PH7735_01307 | Not Available | Positive | 1440876 - 1441139 | 9809.68 |
| inner membrane lipoprotein yiad precursor | PH7735_01308 | P65594 | Positive | 1441465 - 1443393 | 70292.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
