Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_01289 | Not Available | Negative | 1393075 - 1393578 | 17298.6 |
| immunogenic protein mpt70 precursor | PH7735_01290 | P74615 | Negative | 1393662 - 1394147 | 16356.7 |
| hypothetical protein | PH7735_01291 | Not Available | Negative | 1394423 - 1395337 | 33060.3 |
| putative dienelactone hydrolase | PH7735_01292 | Not Available | Positive | 1395698 - 1397014 | 46723.8 |
| hypothetical protein | PH7735_01293 | Not Available | Positive | 1397316 - 1397804 | 17323.7 |
| ferric reductase like transmembrane component | PH7735_01294 | Not Available | Positive | 1397824 - 1398429 | 21967.0 |
| cyclolysin | PH7735_01295 | Not Available | Positive | 1398681 - 1400171 | 50333.4 |
| glycine betaine transporter opud | PH7735_01296 | Not Available | Negative | 1400271 - 1402085 | 63917.6 |
| hypothetical protein | PH7735_01297 | Not Available | Positive | 1402564 - 1402842 | 10063.5 |
| cyclolysin | PH7735_01298 | Not Available | Positive | 1403046 - 1404806 | 61683.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
