Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkaline phosphatase synthesis sensor protein phor | PH7735_01259 | Not Available | Positive | 1335764 - 1337221 | 53422.4 |
| hypothetical protein | PH7735_01260 | Not Available | Positive | 1337218 - 1337592 | 13654.5 |
| chemotaxis protein chey | PH7735_01261 | A0QTK2 | Negative | 1337600 - 1337986 | 13988.7 |
| cyclolysin | PH7735_01262 | Not Available | Positive | 1338363 - 1340306 | 67324.2 |
| cyclolysin | PH7735_01263 | Not Available | Positive | 1340463 - 1342943 | 85911.2 |
| hemolysin, chromosomal | PH7735_01264 | Not Available | Positive | 1343057 - 1345276 | 75020.0 |
| cyclolysin | PH7735_01265 | Not Available | Positive | 1345439 - 1348009 | 88876.8 |
| hemolysin ia | PH7735_01266 | Not Available | Positive | 1348247 - 1349788 | 54942.8 |
| hemolysin, chromosomal | PH7735_01267 | P08472 | Negative | 1349858 - 1352008 | 74458.5 |
| bifunctional protein paaz | PH7735_01268 | Not Available | Negative | 1352152 - 1352622 | 17333.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
