Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase h | PH7735_01229 | P06131 | Negative | 1303402 - 1306299 | 107445.0 |
| formate dehydrogenase region tat target | PH7735_01230 | Not Available | Negative | 1306406 - 1306597 | 6579.62 |
| chaperone protein tord | PH7735_01231 | Not Available | Negative | 1306647 - 1307273 | 22572.8 |
| hypothetical protein | PH7735_01232 | Not Available | Negative | 1307270 - 1307893 | 22713.0 |
| hypothetical protein | PH7735_01233 | Not Available | Negative | 1307890 - 1308480 | 21915.8 |
| seven-iron ferredoxin | PH7735_01234 | Not Available | Positive | 1308776 - 1310749 | 69700.8 |
| hypothetical protein | PH7735_01235 | Not Available | Negative | 1310743 - 1311546 | 29655.7 |
| hypothetical protein | PH7735_01236 | Not Available | Positive | 1311547 - 1311738 | 6989.35 |
| cell division inhibitor mind | PH7735_01237 | P53383 | Positive | 1311743 - 1312816 | 37132.3 |
| hypothetical protein | PH7735_01238 | Not Available | Positive | 1312813 - 1313520 | 24993.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
