Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter, divalent anion:na+ symporter (dass) family | PH7735_01189 | P72958 | Negative | 1262200 - 1263972 | 62450.2 |
| putative transcriptional regulatory protein | PH7735_01190 | Q1GFE0 | Positive | 1264169 - 1264909 | 26897.3 |
| hypothetical protein | PH7735_01191 | Not Available | Negative | 1264963 - 1265826 | 31638.5 |
| putative hth-type transcriptional regulatorc/mt2039 | PH7735_01192 | P67666 | Negative | 1265848 - 1266732 | 31860.5 |
| arginine exporter protein argo | PH7735_01193 | P64904 | Positive | 1266828 - 1267427 | 21219.2 |
| carboxylate/amino acid/amine transporter | PH7735_01194 | A0A0H2ZHZ4 | Positive | 1267589 - 1268464 | 31326.9 |
| fatty acid metabolism regulator protein | PH7735_01195 | C0RHQ4 | Positive | 1268574 - 1269149 | 20705.2 |
| choline-sulfatase | PH7735_01196 | Not Available | Positive | 1269146 - 1270654 | 57521.3 |
| putative oxidoreductase | PH7735_01197 | Q99LB2 | Negative | 1270658 - 1271389 | 26610.2 |
| hypothetical protein | PH7735_01198 | Not Available | Negative | 1271391 - 1271939 | 20051.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
