Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_01169 | Not Available | Positive | 1238774 - 1240054 | 47431.4 |
| putative inner membrane protein | PH7735_01170 | P33015 | Negative | 1239990 - 1241051 | 36107.6 |
| glutathione transport system permease protein gsid | PH7735_01171 | Not Available | Negative | 1241257 - 1242225 | 35511.1 |
| glutathione transport system permease protein gsic | PH7735_01172 | P42062 | Negative | 1242218 - 1243225 | 37743.3 |
| glutathione-binding protein gsib precursor | PH7735_01173 | P42061 | Negative | 1243353 - 1245053 | 61067.9 |
| glutathione import atp-binding protein gsia | PH7735_01174 | Not Available | Positive | 1245347 - 1247167 | 67300.8 |
| acetylornithine deacetylase | PH7735_01175 | O68873 | Positive | 1247169 - 1248332 | 42044.1 |
| sarcosine oxidase subunit beta | PH7735_01176 | Q89T28 | Positive | 1248339 - 1249682 | 48580.2 |
| putative hydrolase yxep | PH7735_01177 | Not Available | Positive | 1249706 - 1250878 | 41957.6 |
| putative hydrolase yxep | PH7735_01178 | Not Available | Positive | 1250901 - 1252064 | 41761.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
