Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_01139 | Not Available | Negative | 1206809 - 1207153 | 12411.6 |
| putative peptidase | PH7735_01140 | Q1JPJ2 | Negative | 1207238 - 1209040 | 65382.7 |
| aerobic cobaltochelatase subunit cobt | PH7735_01141 | P29934 | Negative | 1209094 - 1210971 | 69578.3 |
| hypothetical protein | PH7735_01142 | Not Available | Negative | 1210968 - 1211375 | 15085.9 |
| aerobic cobaltochelatase subunit cobs | PH7735_01143 | P29933 | Negative | 1211368 - 1212354 | 36812.7 |
| peptide methionine sulfoxide reductase msrb | PH7735_01144 | Q8UGX7 | Positive | 1212554 - 1213030 | 17457.9 |
| hypothetical protein | PH7735_01145 | Not Available | Positive | 1213480 - 1213743 | 9400.16 |
| putative l,d-transpeptidase ynhg precursor | PH7735_01146 | Not Available | Negative | 1213829 - 1214476 | 23541.8 |
| chaperone protein dnaj | PH7735_01147 | P29944 | Negative | 1214725 - 1215348 | 23706.7 |
| transcriptional regulator bola | PH7735_01148 | Not Available | Positive | 1215423 - 1215680 | 9215.86 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
