Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_01129 | Not Available | Positive | 1194698 - 1194955 | 10172.0 |
| udp-n-acetylenolpyruvoylglucosamine reductase | PH7735_01130 | Q1GIU8 | Positive | 1195030 - 1195956 | 32758.9 |
| d-alanine--d-alanine ligase b | PH7735_01131 | Q1GIU7 | Positive | 1196042 - 1196956 | 32952.1 |
| cell division protein ftsq | PH7735_01132 | F7ZDD2 | Positive | 1196944 - 1197822 | 33252.6 |
| cell division protein ftsa | PH7735_01133 | O30994 | Positive | 1197819 - 1199153 | 48404.1 |
| cell division protein ftsz | PH7735_01134 | P30327 | Positive | 1199508 - 1201160 | 58006.7 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | PH7735_01135 | B4RFF2 | Positive | 1201366 - 1202286 | 32678.3 |
| competence lipoprotein coml | PH7735_01136 | Q9A6U9 | Positive | 1202397 - 1203251 | 32255.7 |
| recombination protein n | PH7735_01137 | Q92J40 | Positive | 1203287 - 1204933 | 58560.1 |
| h(+)/cl(-) exchange transporter clca | PH7735_01138 | Q8RXR2 | Positive | 1205066 - 1206754 | 59511.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
