Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavoprotein, family | PH7735_01119 | P37631 | Negative | 1184024 - 1185274 | 45414.0 |
| putative o-linked n-acetylglucosamine transferase, spindly family | PH7735_01120 | Not Available | Negative | 1185392 - 1186726 | 47894.4 |
| hypothetical protein | PH7735_01121 | Not Available | Positive | 1186828 - 1187049 | 8245.61 |
| hypothetical protein | PH7735_01122 | Not Available | Positive | 1187061 - 1187750 | 25768.1 |
| ribonuclease z | PH7735_01123 | Not Available | Positive | 1187802 - 1189241 | 53954.0 |
| cell division protein ftsw | PH7735_01124 | B8H092 | Positive | 1189572 - 1190738 | 42038.3 |
| udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | PH7735_01125 | Q163J0 | Positive | 1190735 - 1191832 | 38514.5 |
| udp-n-acetylmuramate--l-alanine ligase | PH7735_01126 | A8LS63 | Positive | 1191845 - 1193239 | 49730.2 |
| putative amino acid permease yhdg | PH7735_01127 | O07576 | Positive | 1193263 - 1194450 | 40364.5 |
| hypothetical protein | PH7735_01128 | Not Available | Positive | 1194447 - 1194701 | 9443.97 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
