Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_01029 | Not Available | Positive | 1095699 - 1096304 | 21773.0 |
| n-acyltransferase ynca | PH7735_01030 | P76112 | Positive | 1096301 - 1096783 | 17589.2 |
| dnaj-like protein djla | PH7735_01031 | Q45885 | Positive | 1096826 - 1097506 | 25387.2 |
| endonuclease/exonuclease/phosphatase family protein | PH7735_01032 | Not Available | Positive | 1097506 - 1098531 | 38475.6 |
| hypothetical protein | PH7735_01033 | Not Available | Positive | 1098572 - 1098943 | 13670.3 |
| hemolysin, chromosomal | PH7735_01034 | Not Available | Positive | 1099328 - 1100962 | 57657.6 |
| guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | PH7735_01035 | Q9X8H1 | Negative | 1101190 - 1102731 | 57266.0 |
| polyphosphate kinase | PH7735_01036 | Q2IX63 | Negative | 1102783 - 1104957 | 81288.6 |
| hypothetical protein | PH7735_01037 | Not Available | Negative | 1105037 - 1105708 | 24377.5 |
| pheromone autoinducer 2 transporter | PH7735_01038 | Q9ZCT3 | Negative | 1105716 - 1106780 | 38282.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
