Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PH7735_01019 | Not Available | Positive | 1087020 - 1087421 | 15160.9 |
| hypothetical protein | PH7735_01020 | Not Available | Positive | 1087418 - 1087774 | 13272.0 |
| hypothetical protein | PH7735_01021 | Not Available | Positive | 1087767 - 1088198 | 15511.3 |
| hypothetical protein | PH7735_01022 | Not Available | Positive | 1088404 - 1088550 | 5064.15 |
| hypothetical protein | PH7735_01023 | Not Available | Positive | 1088629 - 1088991 | 13819.2 |
| hypothetical protein | PH7735_01024 | Not Available | Positive | 1088988 - 1089548 | 19425.8 |
| acetyl-/propionyl-coenzyme a carboxylase alpha chain | PH7735_01025 | Q5LUF3 | Positive | 1089538 - 1091583 | 74360.2 |
| hypothetical protein | PH7735_01026 | Not Available | Negative | 1091659 - 1092105 | 16932.5 |
| methylmalonyl-coa mutase | PH7735_01027 | Q3J4D7 | Positive | 1092210 - 1094336 | 77256.7 |
| sodium/proton antiporter nhaa | PH7735_01028 | Q4KH68 | Negative | 1094424 - 1095617 | 42500.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
