Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| catalase-peroxidase | PH7735_01009 | Q479B7 | Positive | 1073733 - 1075937 | 79469.4 |
| transcriptional regulator beti | PH7735_01010 | C6DKY6 | Negative | 1076025 - 1076618 | 22624.2 |
| bcct family transporter | PH7735_01011 | Not Available | Positive | 1076784 - 1077995 | 45554.5 |
| betaine aldehyde dehydrogenase | PH7735_01012 | A3PI00 | Positive | 1078099 - 1079550 | 51304.8 |
| choline dehydrogenase | PH7735_01013 | A6X2G7 | Positive | 1079616 - 1081274 | 60525.9 |
| hypothetical protein | PH7735_01014 | Not Available | Positive | 1081372 - 1081611 | 9417.12 |
| alpha/beta hydrolase family protein | PH7735_01015 | P54069 | Negative | 1081593 - 1082405 | 29411.3 |
| anaerobic benzoate catabolism transcriptional regulator | PH7735_01016 | Q3J4E6 | Negative | 1082450 - 1083850 | 52005.2 |
| sulfonamide resistance protein | PH7735_01017 | P37597 | Negative | 1084027 - 1085241 | 43036.5 |
| putative propionyl-coa carboxylase beta chain 5 | PH7735_01018 | Q3J4E3 | Positive | 1085410 - 1086942 | 56026.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
