Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific tyrosine recombinase xerc | PH7735_00969 | P16407 | Positive | 1019338 - 1020342 | 38473.4 |
| hypothetical protein | PH7735_00970 | Not Available | Positive | 1020388 - 1020600 | 7467.59 |
| Trna-cys | Not Available | Not Available | Positive | 1020699 - 1020772 | Not Available |
| hemolysin, chromosomal | PH7735_00972 | Not Available | Positive | 1021006 - 1023270 | 77499.8 |
| putative cadmium-transporting atpase | PH7735_00973 | P30336 | Negative | 1023339 - 1025576 | 77468.2 |
| zn(ii)-responsive regulator of znta | PH7735_00974 | P0ACS6 | Positive | 1025715 - 1026143 | 16276.4 |
| phosphonoacetate hydrolase | PH7735_00975 | Not Available | Positive | 1026253 - 1027131 | 32728.6 |
| arsenic efflux pump protein | PH7735_00976 | P9WPD9 | Negative | 1027262 - 1028626 | 48411.2 |
| putative manganese-dependent inorganic pyrophosphatase | PH7735_00977 | Not Available | Negative | 1028684 - 1029172 | 17723.6 |
| hypothetical protein | PH7735_00978 | Not Available | Negative | 1029294 - 1029410 | 4681.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
