Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sn-glycerol-3-phosphate transport system permease protein ugpa | PH7735_00959 | O32155 | Positive | 1008193 - 1009065 | 32826.8 |
| trehalose transport system permease protein sugb | PH7735_00960 | Q9K489 | Positive | 1009065 - 1009904 | 30985.5 |
| putative small integral membrane protein | PH7735_00961 | Not Available | Positive | 1009925 - 1010197 | 10242.8 |
| bacterial extracellular solute-binding protein | PH7735_00962 | Not Available | Positive | 1010265 - 1011986 | 63093.6 |
| glycerol kinase | PH7735_00963 | Not Available | Positive | 1012131 - 1013618 | 54387.5 |
| 1,3-propanediol dehydrogenase | PH7735_00964 | A6ZTT5 | Positive | 1013766 - 1014917 | 39987.1 |
| hypothetical protein | PH7735_00965 | Not Available | Positive | 1015414 - 1015980 | 20069.8 |
| hypothetical protein | PH7735_00966 | Not Available | Negative | 1016202 - 1017038 | 31571.8 |
| hemin importer atp-binding subunit | PH7735_00967 | Not Available | Negative | 1017028 - 1018317 | 48404.4 |
| hypothetical protein | PH7735_00968 | Not Available | Positive | 1019178 - 1019351 | 6334.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
