Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Shimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Shimia |
| Species | Shimia thalassica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
954692 bp
Thymine Count
975031 bp
Guanine Count
1249958 bp
Cytosine Count
1178635 bp
Genome Length
4358316 bp
Protein-coding Genes
4047 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-d-manno-octulosonic acid transferase | PH7735_00059 | Not Available | Negative | 75518 - 76732 | 44540.1 |
| hypothetical protein | PH7735_00060 | Not Available | Negative | 76742 - 76984 | 9101.65 |
| gmp synthase | PH7735_00061 | Not Available | Positive | 77141 - 77884 | 27280.1 |
| inositol-1-monophosphatase | PH7735_00062 | Q92M71 | Negative | 77968 - 78747 | 28091.3 |
| peptidase pmba | PH7735_00063 | P0AFK1 | Negative | 78734 - 80074 | 46766.0 |
| hypothetical protein | PH7735_00064 | Not Available | Negative | 80231 - 81727 | 52725.4 |
| glucose 1-dehydrogenase 2 | PH7735_00065 | Q49WS9 | Positive | 81859 - 82611 | 26331.4 |
| putative enoyl-coa hydratase echa8 | PH7735_00066 | A4YI89 | Positive | 82608 - 83219 | 21249.0 |
| hypothetical protein | PH7735_00067 | Not Available | Positive | 83350 - 83475 | 4552.54 |
| potassium efflux system kefa precursor | PH7735_00068 | O28726 | Positive | 83633 - 84952 | 48209.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
