Pseudonocardia sp. HH130630-07

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Pseudonocardia

Description

Pseudonocardia sp. HH130630-07 is a rod-shaped bacterium notable for possessing three replicons, indicating a complex genomic structure that may contribute to its adaptability and metabolic diversity. The presence of multiple replicons can often enhance the organism's ability to regulate gene expression and respond to environmental changes effectively. The genomic data for Pseudonocardia sp. HH130630-07 is archived under the accessions NZ_CP013854.1, NZ_CP013855.1, and NZ_CP013856.1. These accessions suggest that the organism has been sequenced, providing insights into its genetic makeup and potential functionalities. Understanding the characteristics and genomic architecture of Pseudonocardia sp. HH130630-07 is essential for exploring its ecological roles. Members of the Pseudonocardia genus are typically found in soil and are known for their interactions with other microorganisms, including their potential for antibiotic production. This highlights a significant ecological insight: the adaptability and metabolic versatility afforded by multiple replicons may allow Pseudonocardia sp. HH130630-07 to thrive in diverse environments and engage in complex interactions within microbial communities. Such interactions can impact nutrient cycling and the stability of ecosystems where these bacteria reside.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusPseudonocardia
SpeciesPseudonocardia sp. HH130630-07
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence.

Gene Summary

Adenine Count

53625 bp

Thymine Count

51275 bp

Guanine Count

135824 bp

Cytosine Count

134994 bp

Genome Length

375718 bp

Protein-coding Genes

298 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
isochorismatase family proteinAFB00_RS28830Not AvailableNegative6115427 - 611608923961.6
fad-dependent oxidoreductaseAFB00_RS28835Not AvailableNegative6116116 - 611766953010.2
phza/phzb family proteinAFB00_RS28840Not AvailableNegative6117704 - 611818618693.9
fad-binding proteinAFB00_RS28845Not AvailableNegative6118465 - 611998551863.0
response regulator transcription factorAFB00_RS28850Not AvailableNegative6120027 - 612064422379.9
sensor histidine kinaseAFB00_RS28855Not AvailableNegative6120641 - 612171437765.9
hypothetical proteinAFB00_RS28860Not AvailableNegative6121795 - 61220348634.04
nicotinamide mononucleotide transporter family proteinAFB00_RS33635Not AvailablePositive6122208 - 612284622862.2
shikimate dehydrogenaseAFB00_RS33640Not AvailablePositive6122864 - 612370327769.5
duf2256 and duf3253 domain-containing proteinAFB00_RS28875Not AvailablePositive6123757 - 612411913759.5

Displaying genes 6141 – 6150 of 6323 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.