Pseudonocardia sp. HH130630-07

rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Pseudonocardia

Description

Pseudonocardia sp. HH130630-07 is a rod-shaped bacterium notable for possessing three replicons, indicating a complex genomic structure that may contribute to its adaptability and metabolic diversity. The presence of multiple replicons can often enhance the organism's ability to regulate gene expression and respond to environmental changes effectively. The genomic data for Pseudonocardia sp. HH130630-07 is archived under the accessions NZ_CP013854.1, NZ_CP013855.1, and NZ_CP013856.1. These accessions suggest that the organism has been sequenced, providing insights into its genetic makeup and potential functionalities. Understanding the characteristics and genomic architecture of Pseudonocardia sp. HH130630-07 is essential for exploring its ecological roles. Members of the Pseudonocardia genus are typically found in soil and are known for their interactions with other microorganisms, including their potential for antibiotic production. This highlights a significant ecological insight: the adaptability and metabolic versatility afforded by multiple replicons may allow Pseudonocardia sp. HH130630-07 to thrive in diverse environments and engage in complex interactions within microbial communities. Such interactions can impact nutrient cycling and the stability of ecosystems where these bacteria reside.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusPseudonocardia
SpeciesPseudonocardia sp. HH130630-07
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence.

Gene Summary

Adenine Count

53625 bp

Thymine Count

51275 bp

Guanine Count

135824 bp

Cytosine Count

134994 bp

Genome Length

375718 bp

Protein-coding Genes

298 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome maturation factor rimpAFB00_RS21090Not AvailablePositive4444504 - 444510621563.1
transcription termination factor nusaAFB00_RS21095Not AvailablePositive4445103 - 444614336723.5
ylxr family proteinAFB00_RS32220Not AvailablePositive4446176 - 444655313758.4
translation initiation factor if-2AFB00_RS21100Not AvailablePositive4446651 - 4449656102837.0
duf503 domain-containing proteinAFB00_RS21105Not AvailablePositive4449732 - 445002210515.8
30s ribosome-binding factor rbfaAFB00_RS21110Not AvailablePositive4450086 - 445053215885.8
bifunctional oligoribonuclease/pap phosphatase nrnaAFB00_RS21115Not AvailablePositive4450529 - 445154534059.4
class i sam-dependent methyltransferaseAFB00_RS21120Not AvailablePositive4451628 - 445228123567.1
mate family efflux transporterAFB00_RS21125Not AvailablePositive4452285 - 445366146730.6
atp-binding proteinAFB00_RS21130Not AvailableNegative4453743 - 445548260218.9

Displaying genes 4571 – 4580 of 6323 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.