Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia sp. HH130630-07 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence.
Gene Summary
Adenine Count
53625 bp
Thymine Count
51275 bp
Guanine Count
135824 bp
Cytosine Count
134994 bp
Genome Length
375718 bp
Protein-coding Genes
298 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | AFB00_RS20645 | Not Available | Positive | 4356277 - 4357422 | 38419.7 |
| rip metalloprotease | AFB00_RS20650 | Not Available | Positive | 4357419 - 4358738 | 47088.7 |
| hypothetical protein | AFB00_RS20655 | Not Available | Positive | 4358735 - 4359223 | 18634.9 |
| hypothetical protein | AFB00_RS20660 | Not Available | Negative | 4359230 - 4359484 | 9046.72 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | AFB00_RS20665 | Not Available | Positive | 4359575 - 4360729 | 40591.0 |
| gnat family n-acetyltransferase | AFB00_RS20670 | Not Available | Positive | 4360758 - 4361591 | 29815.7 |
| nad(p)/fad-dependent oxidoreductase | AFB00_RS20675 | Not Available | Negative | 4361554 - 4362810 | 43391.1 |
| marr family winged helix-turn-helix transcriptional regulator | AFB00_RS20680 | Not Available | Positive | 4362868 - 4363311 | 15844.0 |
| penicillin-binding transpeptidase domain-containing protein | AFB00_RS20685 | Not Available | Positive | 4363402 - 4365246 | 62262.6 |
| duf3054 domain-containing protein | AFB00_RS20690 | Not Available | Positive | 4365274 - 4365654 | 13019.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
