Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Pseudonocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Pseudonocardia |
| Species | Pseudonocardia sp. HH130630-07 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudonocardia sp. HH130630-07 plasmid pLS2-1, complete sequence.
Gene Summary
Adenine Count
53625 bp
Thymine Count
51275 bp
Guanine Count
135824 bp
Cytosine Count
134994 bp
Genome Length
375718 bp
Protein-coding Genes
298 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | AFB00_RS20595 | Not Available | Positive | 4346254 - 4347363 | 39660.6 |
| abc transporter atp-binding protein | AFB00_RS20600 | Not Available | Negative | 4347460 - 4348584 | 40237.1 |
| carbohydrate abc transporter permease | AFB00_RS20605 | Not Available | Negative | 4348639 - 4349517 | 31257.8 |
| carbohydrate abc transporter permease | AFB00_RS20610 | Not Available | Negative | 4349517 - 4350377 | 31201.8 |
| sugar abc transporter substrate-binding protein | AFB00_RS20615 | Not Available | Negative | 4350455 - 4351717 | 45447.5 |
| laci family dna-binding transcriptional regulator | AFB00_RS20620 | Not Available | Positive | 4352099 - 4353076 | 34050.4 |
| atp-dependent dna ligase | AFB00_RS20625 | Not Available | Negative | 4353137 - 4354207 | 39997.6 |
| g/u mismatch-specific dna glycosylase | AFB00_RS20630 | Not Available | Positive | 4354319 - 4354885 | 20366.4 |
| non-homologous end-joining dna ligase | AFB00_RS20635 | Not Available | Negative | 4354931 - 4355902 | 36135.3 |
| duf2631 domain-containing protein | AFB00_RS34190 | Not Available | Negative | 4355919 - 4356179 | 9554.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
